BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008A11LP1|AL425798
(811 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1750 1600 0.0
>3x_Contig1750
Length = 14427
Score = 1600 bits (805), Expect = 0.0
Identities = 808/811 (99%)
Strand = Plus / Minus
Query: 1 tgatcagttactaaatactgtcatgcgtggccttgattgttacgttccctatctgaaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2314 tgatcagttactaaatactgtcatgcgtggccttgattgttacgttccctatctgaaaat 2255
Query: 61 attatcatttattggttgaacaaaaaagggtaaagattagtagttactgtcttggttktt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 2254 attatcatttattggttgaacaaaaaagggtaaagattagtagttactgtcttggttgtt 2195
Query: 121 kcggctccatggagcagtgagcttttcgagatccatttcatagttacctttgtgtgcccc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2194 gcggctccatggagcagtgagcttttcgagatccatttcatagttacctttgtgtgcccc 2135
Query: 181 actgcatgttgcagtcatagcagaaggatctggaccaattaacaaagttccatgccatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2134 actgcatgttgcagtcatagcagaaggatctggaccaattaacaaagttccatgccatgt 2075
Query: 241 atcaccgcgacacatggtgatacaatagatgtcagaaaaccagttaggctcaactgaatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2074 atcaccgcgacacatggtgatacaatagatgtcagaaaaccagttaggctcaactgaatc 2015
Query: 301 aatgactcccttgatagcaccagcaattgttttctgttctactgtagaaccacagttgcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2014 aatgactcccttgatagcaccagcaattgttttctgttctactgtagaaccacagttgcc 1955
Query: 361 tccactcgagaagtacctgtaccacacgccacccatttkaccatgtatttcatcatcgtg 420
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1954 tccactcgagaagtacctgtaccacacgccacccatttgaccatgtatttcatcatcgtg 1895
Query: 421 agcacgggcatgctcataggcactccaagctccgctcaatataagcagcggcaatgcgca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1894 agcacgggcatgctcataggcactccaagctccgctcaatataagcagcggcaatgcgca 1835
Query: 481 ataatttaggaagcagcgacctgcacccttgacccaagcacagaatttaatgattttgct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1834 ataatttaggaagcagcgacctgcacccttgacccaagcacagaatttaatgattttgct 1775
Query: 541 tctaggattgaacttcaacttaatgaatttgcagtatgtaagcgagctcttcccgcttat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1774 tctaggattgaacttcaacttaatgaatttgcagtatgtaagcgagctcttcccgcttat 1715
Query: 601 aggttaaattctttgacattttggacaggaggtctacttatgatggcattgaattctaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1714 aggttaaattctttgacattttggacaggaggtctacttatgatggcattgaattctaat 1655
Query: 661 ttgatgtctcttaaatactttgaaaggtattaaattgaaaatgcttaacctcgtggaaaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1654 ttgatgtctcttaaatactttgaaaggtattaaattgaaaatgcttaacctcgtggaaaa 1595
Query: 721 agtgtcgtgcctttccatataaaaggctaatgaaaacacctagaagcgagcagatgtctt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1594 agtgtcgtgcctttccatataaaaggctaatgaaaacacctagaagcgagcagatgtctt 1535
Query: 781 tgaagcacaacaggcaccgtggaaccattga 811
|||||||||||||||||||||||||||||||
Sbjct: 1534 tgaagcacaacaggcaccgtggaaccattga 1504
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5286
Number of Sequences: 1807
Number of extensions: 5286
Number of successful extensions: 24
Number of sequences better than 1.0e-20: 1
length of query: 811
length of database: 10,358,551
effective HSP length: 16
effective length of query: 795
effective length of database: 10,329,639
effective search space: 8212063005
effective search space used: 8212063005
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)